Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865913.1_cds_XP_016432514.1_28756
CDS Infomation

[gene=LOC107759156] [db_xref=GeneID:107759156] [protein=vacuolar-sorting receptor 1-like] [protein_id=XP_016432514.1] [location=complement(join(4527..4622,5313..5419,5670..5798,6100..6166,6388..6470,6584..6665,6775..6851,7303..7386,7470..7539,7635..7723,8581..9273,10061..10355))] [gbkey=CDS]
Sequence

ATGAAAGGAAAGTTAGGGTTTTTAGTGTGTATTTTGTGTGTGCTGTGTGGGTCTTGTTTG
GGTAGATTTGTGGTGGAGAAGAACAGTTTGAGAGTAACGTCGCCAAGCTCAATCAAAGAT
GTGTATGAGTGTGCAATTGGGAACTTTGGGGTCCCACAATATGGAGGAACCATGGTTGGT
ATTGTTATGTACCCAAAAGCTAATCAAAAGTCTTGTAAGAATTTTGCAGATTTTGATATC
TCCTTCAAATCTAAGCCTGGTGCCATGCCTGTCTTCCTTCTTGTTGATAGAGGAGATTGC
TATTTCACACTGAAGGCTTGGAATGCTCAGAGAGCTGGAGCAGGCGCTATTCTTGTTGCC
GATGACCGTGTTGAACCTTTAATTACCATGGACACGCCTGAGGAAGAGGATGCACAGGCA
GATTATTTGCAAAATATAACTATTCCATCGGCTTTAATTAGCAAATCCCTTGGGGATAGC
ATCAAGAAGGAACTCTCTAGAGGAGAAATGGTTAACATAAACCTCGATTGGAGAGAGGCT
CTTCCGCATCCTGATGAGCGAGTGGAGTATGAATTTTGGACCAACAGTAATGATGAGTGT
GGCCCCAAGTGTGAAAGCCAGATAGAGTTTGTCAAAAACTTCAAAGGGGCTGCCCAGATA
CTTGAACAGAAGGGTTATACACAGTTTACTCCCCATTACATAACTTGGTATTGCCCAGAG
GCTTTTATTTTGAGCAAGCAATGCAAGTCTCAGTGTATCAATCATGGAAGATACTGTGCT
CCAGACCCTGAGCAAGACTTCAGTAAAGGTTATGATGGAAAGGATGTTGTTCTGCAAAAC
TTAAGGCAGGCTTGTTTTTTCAAGGTTGCCAATGAAAGTGGAAAACCCTGGTTGTGGTGG
GATTATGTCACTGACTTTGCAATACGGTGCCCCATGAAAGAGAAGAAATACACGAAAGAA
TGTGCAGATCAAGTAATCAAGTCACTTGGCTTTGACGTCAAACAGATTGAAAAATGTGTT
GGAAATCCTGAAGCAGATACTGACAACCCTGTTCTAAAGGCTGAACAGGATTCACAGATA
GGCAAGGGTGCTCGTGGAGATGTGACTATCTTACCAACTCTGGTTATAAACAATAGACAG
TACAGAGGTAAGCTGGACAAAGGAGCAGTCCTCAAGGCGATTTGTTCCGGTTTTGAGGAG
ACAACAGAGCCTGCAATTTGCTTAACTGAAGAAATAGAAACAAATGAATGCTTAGAATCA
AATGGTGGGTGCTGGCAGGACAAGGCTGCTAACATTACTGCATGCCGGGATACTTTCCGT
GGTAGAGTATGTGAATGCCCCATAGTTCAAGGAGTAAAATTTGTTGGTGATGGTTATACT
CGCTGCGAAGCATCTGGAGCATTGCGATGTGAAATAAACAATGGAGGCTGTTGGAAGGGG
ACTCAAGATGGCAGGGCATATTCTGCTTGCATTGATGATCACACAAAGGGTTGCAAATGT
CCACCAGGATTCAAAGGTGATGGAGTGAACAGTTGTGAAGATATTGATGAATGCAAGGAG
AAGCTGGCATGCCAGTGTCCTGAGTGCAAATGCAAGAACACTTGGGGTAGTTTTGATTGC
AGTTGCGGCAGCAATTTGTTGTACATGCATGAACATGACACGTGTATAAGCAAAGATTCC
AAGTCAGAGTTCAGTTGGGGCCTTGTTTGGACGATCATCTTGGGTTTGGCTGTTGCAGCG
GTTGTAGCATTTGCTGTGTACAAGTACAGGATTCGGAGATACATGGACTCAGAGATTCGC
GCCATCATGGCACAATATATGCCTTTGGATCAAGGAGAGGGGGCAAATCATGTTTCCCAT
GGGAACATCTAA

Peptide Sequence

PEP ID

XP_016432514.1
PEP Infomation

PREDICTED: vacuolar-sorting receptor 1-like [Nicotiana tabacum]
Sequence

MKGKLGFLVCILCVLCGSCLGRFVVEKNSLRVTSPSSIKDVYECAIGNFGVPQYGGTMVG
IVMYPKANQKSCKNFADFDISFKSKPGAMPVFLLVDRGDCYFTLKAWNAQRAGAGAILVA
DDRVEPLITMDTPEEEDAQADYLQNITIPSALISKSLGDSIKKELSRGEMVNINLDWREA
LPHPDERVEYEFWTNSNDECGPKCESQIEFVKNFKGAAQILEQKGYTQFTPHYITWYCPE
AFILSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVLQNLRQACFFKVANESGKPWLWW
DYVTDFAIRCPMKEKKYTKECADQVIKSLGFDVKQIEKCVGNPEADTDNPVLKAEQDSQI
GKGARGDVTILPTLVINNRQYRGKLDKGAVLKAICSGFEETTEPAICLTEEIETNECLES
NGGCWQDKAANITACRDTFRGRVCECPIVQGVKFVGDGYTRCEASGALRCEINNGGCWKG
TQDGRAYSACIDDHTKGCKCPPGFKGDGVNSCEDIDECKEKLACQCPECKCKNTWGSFDC
SCGSNLLYMHEHDTCISKDSKSEFSWGLVWTIILGLAVAAVVAFAVYKYRIRRYMDSEIR
AIMAQYMPLDQGEGANHVSHGNI

Transcript Sequence

Gene sequence data has not been registered.